Hubert Rehrauer

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Dr. Hubert Rehrauer

ETH Zurich

Functional Genomics Center Zurich

Winterthurerstr. 190

8057 Zurich


  • phone +41 44 635 39 24 
  • fax +41 44 635 39 22 
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Group Leader of Genome Informatics

Hubert is responsible for the activities related to NGS data analysis and interpretation. He coordinates the data analysis services and collaborations. Additionally, he contributes to the development and establishment of new applications. He gives special support for advanced statistical modelling and data analysis.
Hubert is also member of the Swiss Institute of Bioinformatics (SIB), for details see his SIB Group Leader Page

Publications: Papers listed in PubMed



Epigenetically-driven anatomical diversity of synovial fibroblasts guides joint-specific fibroblast functions
Mojca Frank-Bertoncelj, Michelle Trenkmann, Kerstin Klein, Emmanuel Karouzakis, Hubert Rehrauer, Anna Bratus, Christoph Kolling, Maria Armaka, Andrew Filer, Beat A. Michel, Renate E. Gay, Christopher D. Buckley, George Kollias, Steffen Gay and Caroline Ospelt
Nature Communications, 8: 14852, London: Nature Publishing Group, 2017.


Prognostic value of cross-omics screening for kidney clear cell renal cancer survival
Slavica Dimitrieva, Ralph Schlapbach and Hubert Rehrauer
Biology Direct, 11: 68, London: BioMed Central, 2016.
Diurnal changes in the histone H3 signature H3K9ac|H3K27ac|H3S28p are associated with diurnal gene expression in Arabidopsis
Katja Baerenfaller, Huan Shu, Matthias Hirsch-Hoffmann, Johannes Fütterer, Lennart Opitz, Hubert Rehrauer, Lars Hennig and Wilhelm Gruissem
Plant Cell and Environment, 39 (11): 2557-2569, Oxford: Wiley-Blackwell, 2016.
Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus
Alejandro Fuentes, Natacha Carlos, Yoslaine Ruiz, Danay Callard, Yadira Sánchez, María E. Ochagavía, Jonathan Seguin, Nachelli Malpica-López, Thomas Hohn, Maria R. Lecca, Rosabel Pérez, Vivian Doreste, Hubert Rehrauer, Laurent Farinelli, Merardo Pujol and Mikhail M. Pooggin
Molecular Plant-Microbe Interactions, 29 (3): 197-209, St. Paul, MN: American Phytopathological Society, 2016.
SUSHI: an exquisite recipe for fully documented, reproducible and reusable NGS data analysis
Masaomi Hatakeyama, Lennart Opitz, Giancarlo Russo, Weihong Qi, Ralph Schlapbach and Hubert Rehrauer
BMC Bioinformatics, 17 (1): 228, London: BioMed Central, 2016.
Single-molecule DNA hybridisation studied by using a modified DNA sequencer: a comparison with surface plasmon resonance data
Jens Sobek, Hubert Rehrauer, Stefan Schauer, David Fischer, Andrea Patrignani, Stephan Landgraf, Jonas Korlach and Ralph Schlapbach
Methods and Applications in Fluorescence, 4 (1): 015002, Bristol: Institute of Physics, 2016.


H. pylori-Induced DNA Strand Breaks Are Introduced by Nucleotide Excision Repair Endonucleases and Promote NF-kappaB Target Gene Expression
Mara L. Hartung, Dorothea C. Gruber, Katrin N. Koch, Livia Grüter, Hubert Rehrauer, Nicole Tegtmeyer, Steffen Backert and Anne Müller
Cell Reports, 13 (1): 70-79, New York, NY: Elsevier, 2015.
Insight into the beneficial immunomodulatory mechanism of the sevoflurane metabolite hexafluoro-2-propanol in a rat model of endotoxaemia
Martin Urner, Martin Schlapfer, Inge K. Herrmann, Melanie Hasler, R.R. Schimmer, Christa Booy, Birgit Roth-Z'Graggen, Hubert Rehrauer, F. Aigner, Richard D. Minshall, Wendelin J. Stark and Beatrice Beck-Schimmer
Clinical and Experimental Immunology, 181 (3): 468-479, Oxford: Wiley-Blackwell, 2015.
Hypoxia attenuates the proinflammatory response in colon cancer cells by regulating IkappaB
K. Müller-Edenborn, K. Léger, J.F. Glaus Garzon, C. Oertli, A. Mirsaidi, P.J. Richards, H. Rehrauer, P. Spielmann, D. Hoogewijs, L. Borsig, M.O. Hottiger and R.H. Wenger
Oncotarget, 6 (24): 20288-20301, Albany, NY: Impact Journals LLC, 2015.
The phosphoinositide 3-kinase p110α isoform regulates leukemia inhibitory factor receptor expression via c-Myc and miR-125b to promote cell proliferation in medulloblastoma
Fabiana Salm, Valeriya Dimitrova, André O. Von Bueren, Paulina Ćwiek, Hubert K. Rehrauer, Valentin G. Djonov, Pascale Anderle and Alexandre Arcaro
PLoS ONE, 10 (4): e0123958, San Francisco, CA: Public Library of Science, 2015.
MicroRNA MiR-199a-5p regulates smooth muscle cell proliferation and morphology by targeting WNT2 signaling pathway
Ali Hashemi Gheinani, Fiona C. Burkhard, Hubert Rehrauer, Catharine Aquino Fournier and Katia Monastyrskaya
Journal of Biological Chemistry, 290 (11): 7067-7086, Bethesda, MD: The American Society for Biochemistry and Molecular Biology, 2015.
Differential gene expression patterns in developing sexually dimorphic rat brain regions exposed to antiandrogenic, estrogenic, or complex endocrine disruptor mixtures: Glutamatergic synapses as target
Walter Lichtensteiger, Catherine Bassetti-Gaille, Oliver Faass, Marta Axelstad, Julie Boberg, Sofie Christiansen, Hubert Rehrauer, Jelena K. Georgijevic, Ulla Hass, Andreas Kortenkamp and Margret Schlumpf
Endocrinology, 156 (4): 1477-1493, Chevy Chase, MD: Endocrine Society, 2015.


Optimization of Critical Hairpin Features Allows miRNA-based Gene Knockdown Upon Single-copy Transduction
Renier Myburgh, Ophélie Cherpin, Erika Schläpfer, Hubert Rehrauer, Roberto F. Speck, Karl-Heinz Krause and Patrick Salmon
Molecular Therapy : Nucleic Acids, 3: e207, New York: Nature, 2014.
Circadian behavior is light-reprogrammed by plastic DNA methylation
Abdelhalim Azzi, Robert Dallmann, Alison Casserly, Hubert Rehrauer, Andrea Patrignani, Bert Maier, Achim Kramer and Steven A. Brown
Nature Neuroscience, 17 (3): 377-382, New York: Nature Publ. Group, 2014.
Induction of the nuclear receptor PPAR-γ by the cytokine GM-CSF is critical for the differentiation of fetal monocytes into alveolar macrophages
Christoph Schneider, Samuel P. Nobs, Michael Kurrer, Hubert Rehrauer, Christoph Thiele and Manfred Kopf
Nature immunology, 15 (11): 1026-1037, New York, NY: Nature Publ. Group, 2014.


Blind spots of quantitative RNA-seq: The limits for assessing abundance, differential expression, and isoform switching
Hubert Rehrauer, Lennart Opitz, Ge Tan, Lina Sieverling and Ralph Schlapbach
BMC bioinformatics, 14: 370, London: BioMed Central, 2013.
An ER-directed transcriptional response to unfolded protein stress in the absence of conserved sensor-transducer proteins in Giardia lamblia
Cornellia Spycher, Emily K. Herman, Laura Morf, Weihong Qi, Hubert Rehrauer, Catharine Aquino Fournier, Joel B. Dacks and Adrian B. Hehl
Molecular microbiology, 88 (4): 754-771, Oxford: Wiley-Blackwell, 2013.
Targeting the Phosphoinositide 3-Kinase p110-alpha Isoform Impairs Cell Proliferation, Survival, and Tumor Growth in Small Cell Lung Cancer
Anna Wojtalla, Barbara Fischer, Nataliya Kotelevets, Francesco A. Mauri, Jens Sobek, Hubert Rehrauer, Carlos Wotzkow, Mario P. Tschan, Michael J. Seckl, Uwe Zangemeister-Wittke and Alexandre Arcaro
Clinical cancer research, 19 (1): 96-105, Philadelphia, PA: American Association for Cancer Research, 2013.
PKC signaling prevents irradiation-induced apoptosis of primary human fibroblasts
A. Bluwstein, N. Kumar, K. Léger, J. Traenkle, J. van Oostrum, H. Rehrauer, M. Baudis and M.O. Hottiger
Cell death & disease, 4: e498, London: Nature, 2013.
Genome-wide analysis of H4K5 acetylation associated with fear memory in mice
C. S. Park, Hubert Rehrauer and Isabelle M. Mansuy
BMC genomics, 14: 539, London: BioMed Central, 2013.
Single molecule interactions studied by using a modified DNA sequencer: A comparison with surface plasmon resonance
Jens Sobek, Stefan Schauer, Hubert Rehrauer, David Fischer, Andrea Patrignani, Stephan Landgraf and Ralph Schlapbach
Proceedings of SPIE, 8596: 85960Y, Bellingham, Washington: SPIE, 2013.
Single-molecule interactions studied by using a modified DNA sequencer: A comparison with surface plasmon resonance data
Jens Sobek, Stefan Schauer, Hubert Rehrauer, David Fischer, Andrea Patrignani, Stephan Landgraf and Ralph Schlapbach
Proceedings of SPIE. 2004-, 8596: 85960Y, Bellingham, WA: SPIE, 2013.


Genome-wide transcription analysis of Escherichia coli in response to extremely low-frequency magnetic fields
Simona G. Huwiler, Christian Beyer, Jürg Fröhlich, Hauke Hennecke, Thomas Egli, David Schürmann, Hubert Rehrauer and Hans-Martin Fischer
Bioelectromagnetics, 33 (6): 488-496, New York: Wiley-Blackwell, 2012.
Role of Hedgehog Signaling in Malignant Pleural Mesothelioma
Yandong Shi, Ubiratan Moura, Isabelle Opitz, Alex Soltermann, Hubert Rehrauer, Svenja Thies, Walter Weder, Rolf A. Stahel and Emanuela Felley-Bosco
Clinical cancer research, 18 (17): 4646-4656, Philadelphia, PA: American Association for Cancer Research, 2012.
RIP-chip-SRM: A new combinatorial large-scale approach identifies a set of translationally regulated bantam/miR-58 targets in C. elegans
Marko Jovanovic, Lukas Reiter, Alejandra Clark, Manuel Weiss, Paola Picotti, Hubert Rehrauer, Andreas Frei, Lukas J. Neukomm, Ethan Kaufman, Bernd Wollscheid, Martin J. Simard, Eric A. Miska, Ruedi Aebersold, Ruedi Gerber and Michael O. Hengartner
Genome Research, 22 (7): 1360-1371, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 2012.
Evaluation of alternative RNA labeling protocols for transcript profiling with Arabidopsis AGRONOMICS1 tiling arrays
Marlen Müller, Andrea Patrignani, Hubert Rehrauer, Wilhelm Gruissem and Lars Hennig
Plant Methods, 8 (1): 18, BioMed Central, 2012.


Interaction of HIF and USF Signaling Pathways in Human Genes Flanked by Hypoxia-Response Elements and E-box Palindromes
Junmin Hu, Daniel P. Stiehl, Claudia Setzer, Daniela Wichmann, Dheeraj A. Shinde, Hubert Rehrauer, Pavel Hradecky, Max Gassmann and Thomas A. Gorr
Molecular cancer research, 9: 1520-1536, Philadelphia, PA: American Asscociation for Cancer Research, 2011.
LIN-39 and the EGFR/RAS/MAPK pathway regulate C. elegans vulval morphogenesis via the VAB-23 zinc finger protein
Mark W. Pellegrino, Sarfarazhussain Farooqui, Erika Fröhli, Hubert Rehrauer, Stéphanie Kaeser-Pebernard, Fritz Müller, Robin B. Gasser and Alex Hajnal
Development, 138 (21): 4649-4660, Cambridge: Company of Biologists, 2011.
Pleural mesothelioma side populations have a precursor phenotype
Claudia Frei, Isabelle Opitz, Alex Soltermann, Bruno Fischer, Ubiratan Moura, Hubert Rehrauer, Walter Weder, Rolf Stahel and Emanuela Felley-Bosco
Carcinogenesis, 32 (9): 1324-1332, Oxford: Oxford University Press, 2011.
Myc-mediated repression of microRNA-34a promotes high-grade transformation of B-cell lymphoma by dysregulation of FoxP1
Vanessa J. Craig, Sergio B. Cogliatti, Jochen Imig, Christoph Renner, Stefan Neuenschwander, Hubert Rehrauer, Ralph Schlapbach, Stephan Dirnhofer, Alexander Tzankov and Anne Müller
Blood, 117 (23): 6227-6236, Washington, DC: American Society of Hematology, 2011.
CD133 Positive Embryonal Rhabdomyosarcoma Stem-Like Cell Population Is Enriched in Rhabdospheres
Dagmar Walter, Sampoorna Satheesha, Patrick Albrecht, Beat C. Bornhauser, Valentina D'Alessandro, Susanne M. Oesch, Hubert Rehrauer, Ivo Leuschner, Ewa Koscielniak, Carole Gengler, Holger Moch, Michele Bernasconi, Felix K. Niggli and Beat W. Schafer
PLoS ONE, 6 (5): e19506, s.l.: Public Library of Science, 2011.
Chronic exposure to cigarette smoke condensate in vitro induces epithelial to mesenchymal transition-like changes in human bronchial epithelial cells, BEAS-2B
Emilija Veljkovic, Josef Jiricny, Mirco Menigatti, Hubert Rehrauer and Wanjiang Han
Toxicology in vitro, 25 (2): 446-453, Oxford: Pergamon Press, 2011.
Application of a nifH microarray to assess the impact of environmental factors on free-living diazotrophs in a glacier forefield
Laurence Duc, Stefan Neuenschwander, Hubert Rehrauer and Josef Zeyer
Canadian journal of microbiology, 57 (2): 105-114, Ottawa: National Research Council of Canada, 2011.
Induction of senescence markers after neo-adjuvant chemotherapy of malignant pleural mesothelioma and association with clinical outcome: An exploratory analysis
Roy Sidi, Giulia Pasello, Isabelle Opitz, Alex Soltermann, Michaela Tutic, Hubert Rehrauer, Walter Weder, Rolf A. Stahel and Emanuela Felley-Bosco
European journal of cancer, 47 (2): 326-332, Amsterdam: Elsevier, 2011.
Epigenetic Silencing of MicroRNA-203 Dysregulates ABL1 Expression and Drives Helicobacter-Associated Gastric Lymphomagenesis
Vanessa J. Craig, Sergio B. Cogliatti, Hubert Rehrauer, Thomas Wündisch and Anne Müller
Cancer research, 71 (10): 3616-3624, Philadelphia, Pa.: American Association for Cancer Research, 2011.
CDCOCA: A statistical method to define complexity dependence of co-occuring chromosomal aberrations
Nitin Kumar, Hubert Rehrauer, Haoyang Cai and Michael Baudis
BMC medical genomics, 4: 21, s.l.: BioMed Central, 2011.
Synthetic transactivation screening reveals ETV4 as broad coactivator of hypoxia-inducible factor signaling
Kristin Wollenick, Jun Hu, Glen Kristiansen, Peter Schraml, Hubert Rehrauer, Utta Berchner-Pfannschmidt, Joachim Fandrey, Roland H. Wenger and Daniel P. Stiehl
Nucleic acids research, Oxford: Oxford University Press, 2011.


Late-gestational systemic hypoxia leads to a similar early gene response in mouse placenta and developing brain
Regina Trollmann, Hubert Rehrauer, Christina Schneider, Gudrun Krischke, Nicolas Huemmler, Stephan Keller, Wolfgang Rascher and Max Gassmann
American Journal of Physiology: Regulatory, integrative and comparative physiology, 299 (6): R1489-R1499, Bethesda, MD: American Physiological Society, 2010.
The transcriptional response to encystation stimuli in Giardia lamblia is restricted to a small set of genes
Laura Morf, Cornelia Spycher, Hubert Rehrauer, Catharine Aquino Fournier, Hilary G. Morrison and Adrian B. Hehl
Eukaryotic cell, 9 (10): 1566-1576, Washington DC: American Society for Microbiology, 2010.
Absence of Poly(ADP-Ribose) Polymerase 1 Delays the Onset of Salmonella enterica Serovar Typhimurium-Induced Gut Inflammation
Matthias Altmeyer, Manja Barthel, Matthias Eberhard, Hubert Rehrauer, Wolf-Dietrich Hardt and Michael O. Hottiger
Infection and immunity, 78 (8): 3420-3431, Washington: American Society for Microbiology, 2010.
A global network of coexisting microbes from environmental and whole-genome sequence data
Samuel Chaffron, Hubert Rehrauer, Jakob Pernthaler and Christian von Mering
Genome research, 20 (7): 947-959, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 2010.
Lysyl oxidase expression is an independent marker of prognosis and a predictor of lymph node metastasis in oral and oropharyngeal squamous cell carcinoma (OSCC)
Andrea Albinger-Hegyi, Sandro J. Stoeckli, Stephan Schmid, Martina Storz, Guergana Iotzova, Nicole M. Probst-Hensch, Hubert Rehrauer, Marianne Tinguely, Holger Moch and Ivan Hegyi
International journal of cancer, 126 (11): 2653-2662, Hoboken, NJ: Wiley-Blackwell, 2010.
The Streptococcus mutans serine/threonine kinase, PknB, regulates competence development, bacteriocin production, and cell wall metabolism
Liliana Danusia Banu, Georg Conrads, Hubert Rehrauer, Haitham Hussain, Elaine Allan and Jan R. van der Ploeg
Infection and immunity, 78 (5): 2209-2220, Washington, DC: American Society for Microbiology, 2010.
Epigenetic mechanisms regulate stage differentiation in the minimized protozoan Giardia lamblia
Sabrina Sonda, Laura Morf, Iveta Bottova, Hansruedi Baetschmann, Hubert Rehrauer, Amedeo Caflisch, Mohamed-Ali Hakimi and Adrian B. Hehl
Molecular microbiology, 76 (1): 48-67, Oxford: Wiley-Blackwell, 2010.
Ablation of Dicer from murine Schwann cells increases their proliferation while blocking myelination
Juliane Bremer, Tracy O'Connor, Cinzia Tiberi, Hubert Rehrauer, Joachim Weis and Adriano Aguzzi
PLoS One, 5 (8): e12450, Lawrence, Kan.: Public Library of Science, 2010.
Rhizobial adaptation to hosts, a new facet in the legume root-nodule symbiosis
Marion Koch, Nathanael Delmotte, Hubert Rehrauer, Julia A. Vorholt, Gabriella Pessi and Hauke Hennecke
Molecular plant-microbe interactions, 23 (6): 784-790, St. Paul: American Phytopathological Society, 2010.
AGRONOMICS1: A new resource for Arabidopsis transcriptome profiling
Hubert Rehrauer, Catharine Aquino, Wilhelm Gruissem, Stefan R. Henz, Pierre Hilson, Sascha Laubinger, Naira Naouar, Andrea Patrignani, Stephane Rombauts, Huan Shu, Yves van de Peer, Marnik Vuylsteke, Detlef Weigel, Georg Zeller and Lars Hennig
Plant physiology, 152 (2): 487-499, Rockville, MD: American Society of Plant Physiologists, 2010.
B-Fabric: The Swiss Army Knife for Life Sciences
Can Tuerker, Fuat Akal, Dieter Joho, Christian Panse, Simon Barkow-Oesterreicher, Hubert Rehrauer and Ralph Spolenak
Proceedings of the 2010 EDBT/ICDT workshops : Lausanne, Switzerland - March 22 - 26, 2010, 426: 717-720, New York, NY: ACM, 2010.


Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function
Monica A. Grobei, Ermir Qeli, Erich Brunner, Hubert Rehrauer, Runxuan Zhang, Bernd Roschitzki, Konrad Basler, Christian H. Ahrens and Ueli Grossniklaus
Genome research, 19 (10): 1786-1800, Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 2009.
Development and experimental validation of a nifH oligonucleotide microarray to study diazotrophic communities in a glacier forefield
Laurence Duc, Stefan Neuenschwander, Hubert Rehrauer, Ulrich Wagner, Jens Sobek, Ralph Schlapbach and Josef Zeyer
Environmental microbiology, 11 (8): 2179-2189, Oxford: Wiley-Blackwell, 2009.
16S rRNA gene-based phylogenetic microarray for simultaneous identification of members of the genus Burkholderia
Susan Schönmann, Alexander Loy, Céline Wimmersberger, Jens Sobek, Catharine Aquino, Peter Vandamme, Beat Frey, Hubert Rehrauer and Leo Eberl
Environmental microbiology, 11 (4): 779-800, Oxford: Wiley-Blackwell, 2009.
C. Maake, T. Lehmann, H. Rehrauer and H. John
European urology Supplements, 8 (4): 189-189, Amsterdam, NL: Elsevier Science, 2009.
Experimental heart transplantation: Effect of cyclosporine on expression and activity of metzincins
Céline C. Berthier, Charles Pally, Gisbert Weckbecker, Friedrich Raulf, Hubert Rehrauer, Ulrich Wagner, Michel Le Hir and Hans-Peter Marti
Swiss medical weekly, 139 (15-16): 233-240, Basel: EMH, Schweizerischer Ärzte-Verlag AG, 2009.
Gene expression profile of bladder tissue of patients with ulcerative interstitial cystitis
Marianne Gamper, Volker Viereck, Verena Geissbühler, Jakob Eberhard, Jochen Binder, Carlo Moll, Hubert Rehrauer and René Moser
BMC genomics, 10: 199, London: BioMed Central, 2009.
Malignant Catarrhal Fever of Cattle Is Associated with Low Abundance of IL-2 Transcript and a Predominantly Latent Profile of Ovine Herpesvirus 2 Gene Expression
Claudia S. Meier-Trummer, Hubert Rehrauer, Marco Franchini, Andrea Patrignani, Ulrich Wagner and Mathias Ackermann
PLoS one, 4 (7): e6265, Lawrence, Kan.: PLoS, 2009.
The CD4+ T Cell-Mediated IFN-gamma Response to Helicobacter Infection Is Essential for Clearance and Determines Gastric Cancer Risk
Ayca Sayi, Esther Kohler, Iris Hitzler, Isabelle Arnold, Reto Schwendener, Hubert Rehrauer and Anne Müller
The journal of immunology, 182 (11): 7085-7101, Bethesda, MD: American Association of Immunologists, 2009.
The B-Fabric life sciences data management system
Can Türker, Dieter Joho, Fuat Akal, Christian Panse, Simon Barkow-Oesterreicher, Hubert Rehrauer and Ralph Schlapbach
GI-Edition - Lecture notes in informatics (LNI). Proceedings, 154: 716-720, Bonn: Gesellschaft für Informatik, 2009.


Functional relevance of novel p300-mediated lysine 314 and 315 acetylation of ReIA/p65
Christine Buerki, Karin M. Rothgiesser, Taras Valovka, Heather R. Owen, Hubert Rehrauer, Monika Fey, William S. Lane and Michael O. Hottiger
Nucleic acids research, 36 (5): 1665-1680, Oxford: Oxford University Press, 2008.
Genome-wide gene expression profiling reveals renal genes regulated during metabolic acidosis
Marta Nowik, M. Rita Lecca, Ana Velic, Hubert Rehrauer, André W. Brändli and Carsten A. Wagner
Physiological genomics, 32 (3): 322-334, Bethesda, Md: American Physiological Society, 2008.
PhyloDetect: a likelihood-based strategy for detecting microorganisms with diagnostic microarrays
Hubert Rehrauer, Susan Schoenmann, Leo Eberl and Ralph Schlapbach
Bioinformatics, 24 (16): I83-I89, Oxford: Oxford University Press, 2008.


Current challenges and approaches for the synergistic use of systems biology data in the scientific community
Christian Ahrens, Ulrich Wagner, Hubert Rehrauer, Can Türker and Ralph Schlapbach
In Plant systems biology, edited by Baginsky, Sacha, and Alisdair R. Fernie, 97: 277-307, Basel: Birkhäuser, 2007.
Genome-wide transcript analysis of Bradyrhizobium japonicum bacteroids in soybean root nodules
Gabriella Pessi, Christian H. Ahrens, Hubert Rehrauer, Andrea Lindemann, Felix Hauser, Hans-Martin Fischer and Hauke Hennecke
Molecular plant-microbe interactions, 20 (11): 1353-1363, St. Paul: American Phytopathological Society, 2007.
MAGMA: analysis of two-channel microarrays made easy
Hubert Rehrauer, Stefan Zoller and Ralph Schlapbach
Nucleic acids research, 35: W86-W90, Oxford: Oxford University Press, 2007.
Transcriptome Profile of Human Colorectal Adenomas
Jacob Sabates-Bellver, Laurens G. Van der Flier, Mariagrazia de Palo, Elisa Cattaneo, Caroline Maake, Hubert Rehrauer, Endre Laczko, Michal A. Kurowski, Janusz M. Bujnicki, Mirco Menigatti, Judith Luz, Teresa V. Ranalli, Vito Gomes, Alfredo Pastorelli, Roberto Faggiani, Marcello Anti, Josef Jiricny, Hans Clevers and Giancarlo Marra
Molecular cancer research, 5 (12): 1263-1275, Birmingham, AL: American Asscociation for Cancer Research, 2007.


Gene expression profiles of different breast cancer cells compared with their responsiveness to fermented mistletoe (Viscum album L.) extracts Iscador from oak (Quercus), pine (Pinus), white fir (Abies) and apple tree (Malus) in vitro
Jenny Eggenschwiler, Andrea Patrignani, Ulrich Wagner, Hubert Rehrauer, Ralph Schlapbach, Lukas Rist, Mac H. Ramos and Angelika Viviani
Arzneimittel-Forschung, 56 (6A): 483-496, Aulendorf: Cantor, 2006.


The role of scale for image description and image query: An application to remote sensing images
Hubert Karl Rehrauer
Selected readings in vision and graphics, Doctoral Thesis, Konstanz, Hartung-Gorre, 2000.
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